Kishi-Kaboshi, M., Abe, F., Kamiya, Y., Kawaura, K., Hisano, H., Sato, K. (2023). Optimizing genome editing efficiency in wheat: Effects of heat treatments and different promoters for single guide RNA expression. Plant Biotechnology, 40(3), 237-245.
Noma S, Yamagishi M, Ogihara Y, Kawaura K. Characterization of α-gliadin alleles of Japanese wheat cultivars in relation to flour dough extensibility and celiac disease epitopes. Journal of Cereal Science. 2023 Jan 1;109:103591.
Bashir K, Todaka D, Rasheed S, Matsui A, Ahmad Z, Sako K, Utsumi Y, Vu AT, Tanaka M, Takahashi S, Ishida J, Tsuboi Y, Watanabe S, Kanno Y, Ando E, Shin KC, Seito M, Motegi H, Sato M, Li R, Kikuchi S, Fujita M, Kusano M, Kobayashi M, Habu Y, Nagano AJ, Kawaura K, Kikuchi J, Saito K, Hirai MY, Seo M, Shinozaki K, Kinoshita T, Seki M. Ethanol-Mediated Novel Survival Strategy against Drought Stress in Plants. Plant Cell Physiol. 2022 Sep 15;63(9):1181-1192. doi: 10.1093/pcp/pcac114. PMID: 36003026; PMCID: PMC9474946.
Nakayama R, Safi MT, Ahmadzai W, Sato K, Kawaura K. Comparative transcriptome analysis of synthetic and common wheat in response to salt stress. Sci Rep. 2022 Jul 7;12(1):11534. doi: 10.1038/s41598-022-15733-2. PMID: 35798819; PMCID: PMC9262916.
Matsui A, Todaka D, Tanaka M, Mizunashi K, Takahashi S, Sunaoshi Y, Tsuboi Y, Ishida J, Bashir K, Kikuchi J, Kusano M, Kobayashi M, Kawaura K, Seki M. Ethanol induces heat tolerance in plants by stimulating unfolded protein response. Plant Mol Biol. 2022 Jun 22. doi: 10.1007/s11103-022-01291-8. Epub ahead of print. PMID: 35729482.
Liu Y, Luo W, Linghu Q, Abe F, Hisano H, Sato K, Kamiya Y, Kawaura K, Onishi K, Endo M, Toki S, Hamada H, Nagira Y, Taoka N, Imai R. In planta Genome Editing in Commercial Wheat Varieties. Front Plant Sci. 2021 Mar 15;12:648841. doi: 10.3389/fpls.2021.648841. PMID: 33790930; PMCID: PMC8006942.
Nishimura K, Handa H, Mori N, Kawaura K, Kitajima A, Nakazaki T. Geographical distribution and adaptive variation of VRN-A3 alleles in worldwide polyploid wheat (Triticum spp.) species collection. Planta. 2021 May 31;253(6):132. doi: 10.1007/s00425-021-03646-9. PMID: 34059984.
Halstead-Nussloch G, Tanaka T, Copetti D, Paape T, Kobayashi F, Hatakeyama M, Kanamori H, Wu J, Mascher M, Kawaura K, Shimizu KK, Handa H. Multiple Wheat Genomes Reveal Novel Gli-2 Sublocus Location and Variation of Celiac Disease Epitopes in Duplicated α-Gliadin Genes. Front Plant Sci. 2021 Sep 3;12:715985. doi: 10.3389/fpls.2021.715985. PMID: 34539709; PMCID: PMC8446623.
Walkowiak S, Gao L, Monat C, Haberer G, Kassa MT, Brinton J, Ramirez-Gonzalez RH, Kolodziej MC, Delorean E, Thambugala D, Klymiuk V, Byrns B, Gundlach H, Bandi V, Siri JN, Nilsen K, Aquino C, Himmelbach A, Copetti D, Ban T, Venturini L, Bevan M, Clavijo B, Koo DH, Ens J, Wiebe K, N'Diaye A, Fritz AK, Gutwin C, Fiebig A, Fosker C, Fu BX, Accinelli GG, Gardner KA, Fradgley N, Gutierrez-Gonzalez J, Halstead-Nussloch G, Hatakeyama M, Koh CS, Deek J, Costamagna AC, Fobert P, Heavens D, Kanamori H, Kawaura K, Kobayashi F, Krasileva K, Kuo T, McKenzie N, Murata K, Nabeka Y, Paape T, Padmarasu S, Percival-Alwyn L, Kagale S, Scholz U, Sese J, Juliana P, Singh R, Shimizu-Inatsugi R, Swarbreck D, Cockram J, Budak H, Tameshige T, Tanaka T, Tsuji H, Wright J, Wu J, Steuernagel B, Small I, Cloutier S, Keeble-Gagnère G, Muehlbauer G, Tibbets J, Nasuda S, Melonek J, Hucl PJ, Sharpe AG, Clark M, Legg E, Bharti A, Langridge P, Hall A, Uauy C, Mascher M, Krattinger SG, Handa H, Shimizu KK, Distelfeld A, Chalmers K, Keller B, Mayer KFX, Poland J, Stein N, McCartney CA, Spannagl M, Wicker T, Pozniak CJ. Multiple wheat genomes reveal global variation in modern breeding. Nature. 2020 Dec;588(7837):277-283. doi: 10.1038/s41586-020-2961-x. Epub 2020 Nov 25. PMID: 33239791; PMCID: PMC7759465.
Shimizu KK, Copetti D, Okada M, Wicker T, Tameshige T, Hatakeyama M, Shimizu-Inatsugi R, Aquino C, Nishimura K, Kobayashi F, Murata K, Kuo T, Delorean E, Poland J, Haberer G, Spannagl M, Mayer KFX, Gutierrez-Gonzalez J, Muehlbauer GJ, Monat C, Himmelbach A, Padmarasu S, Mascher M, Walkowiak S, Nakazaki T, Ban T, Kawaura K, Tsuji H, Pozniak C, Stein N, Sese J, Nasuda S, Handa H. De Novo Genome Assembly of the Japanese Wheat Cultivar Norin 61 Highlights Functional Variation in Flowering Time and Fusarium-Resistant Genes in East Asian Genotypes. Plant Cell Physiol. 2021 Mar 25;62(1):8-27. doi: 10.1093/pcp/pcaa152. PMID: 33244607; PMCID: PMC7991897.
Kamiya Y, Abe F, Mikami M, Endo M, Kawaura K, A rapid method for detection of mutations induced by CRISPR/Cas9-based genome editing in common wheat, Plant Biotechnology, 2020; 37(2) 247-251. doi: 10.5511/plantbiotechnology.20.0404b. PubMed PMID 32821233
Abe F, Haque E, Hisano H, Tanaka T, Kamiya Y, Mikami M, Kawaura K, Endo M, Onishi K, Hayashi T, Sato K. Genome-Edited Triple-Recessive Mutation Alters Seed Dormancy in Wheat. Cell Rep. 2019 Jul 30;28(5):1362-1369.e4. doi: 10.1016/j.celrep.2019.06.090. PubMed PMID: 31365876.
Noma S, Hayakawa K, Abe C, Suzuki S, Kawaura K (2019) Contribution of α-gliadin alleles to the extensibility of flour dough in Japanese wheat cultivars. Journal of Cereal Science, 86, 15-21
Kawaura K, Miura M, Kamei Y, Ikeda TM, Ogihara Y. Molecular characterization of gliadins of Chinese Spring wheat in relation to celiac disease elicitors. Genes Genet Syst. 2018 Jul 13;93(1):9-20. doi: 10.1266/ggs.17-00034. Epub 2018 Jan 17. PubMed PMID: 29343665.
Mishina K, Kawaura K, Kamiya Y, Kajita Y, Mochida K, Tarui H, Tagami M, Suzuki N, Kawai J, Nakamura Y, Yano K, Ogihara Y. Transcriptome of Homoeologous Genes Deduced from the Full-Length cDNA Clones of Common Wheat, Triticum aestivum L. Journal of Genetics & Genomic Sci. 3: 007 (2018)
Kim JM, To TK, Matsui A, Tanoi K, Kobayashi NI, Matsuda F, Habu Y, Ogawa D, Sakamoto T, Matsunaga S, Bashir K, Rasheed S, Ando M, Takeda H, Kawaura K, Kusano M, Fukushima A, Endo TA, Kuromori T, Ishida J, Morosawa T, Tanaka M, Torii C, Takebayashi Y, Sakakibara H, Ogihara Y, Saito K, Shinozaki K, Devoto A, Seki M. Acetate-mediated novel survival strategy against drought in plants. Nat Plants. 2017 Jun 26;3:17097. doi: 10.1038/nplants.2017.97. Erratum in: Nat Plants. 2017 Jul 17;3:17119. PubMed PMID: 28650429.
Torada A, Koike M, Ogawa T, Takenouchi Y, Tadamura K, Wu J, Matsumoto T, Kawaura K, Ogihara Y. A Causal Gene for Seed Dormancy on Wheat Chromosome 4A Encodes a MAP Kinase Kinase. Curr Biol. 2016 Mar 21;26(6):782-7. doi: 10.1016/j.cub.2016.01.063. Epub 2016 Mar 3. PubMed PMID: 26948878.
Noma S*, Kawaura K* (co-first author), Hayakawa K, Abe C, Tsuge N, Ogihara Y. Comprehensive molecular characterization of the α/β-gliadin multigene family in hexaploid wheat. Mol Genet Genomics. 2016 Feb;291(1):65-77. doi: 10.1007/s00438-015-1086-7. Epub 2015 Jul 10. PubMed PMID: 26159870.
Katkout, M., S. Sakuma, K. Kawaura and Y. Ogihara: TaqSH1-D, wheat ortholog of rice seed shattering gene qSH1, maps to the interval of a rachis fragility QTL on chromosome 3DL. Genet. Res. Crop Evol. 62: 979-984 (2015)
Jung Y, Kawaura K, Mishina K, Sakuma S, Kishii M, Ogihara Y. Changes in genome-wide gene expression during allopolyploidization and genome stabilization in hexaploid wheat. Genes Genet Syst. 2014;89(5):215-25. PubMed PMID: 25832748.
Katkout M, Kishii M, Kawaura K, Mishina K, Sakuma S, Umeda K, Takumi S, Nitta M, Nasuda S, Ogihara Y. QTL analysis of genetic loci affecting domestication-related spike characters in common wheat. Genes Genet Syst. 2014;89(3):121-31. PubMed PMID: 25475935.
Suematsu S, Harano K, Tanaka S, Kawaura K, Ogihara Y, Watari Y, Saito O,Tokuda M. (2013) Effects of barley chromosome addition to wheat on behavior and development of Locusta migratoria nymphs. Sci Rep.3:2577 PubMed PMID: 23999457
Yamamoto M, Shitsukawa N, Yamada M, Kato K, Takumi S, Kawaura K, Ogihara Y,Murai K. (2013) Identification of a novel homolog for a calmodulin-binding protein that is upregulated in alloplasmic wheat showing pistillody. Planta. Apr;237(4):1001-13 PubMed PMID: 23192388
Abdollahi P, Kamiya Y, Kawaura K, Ogihara Y. Overexpression of Q/q-related homoeoalleles of hexaploid wheat reveals distinct recovery of flower transformation in the apetala2 mutant of Arabidopsis. Plant Biotechnology 2012. 29, 245-252
Kawaura K, Wu J, Matsumoto T, Kanamori H, Katagiri S, Ogihara Y. Genome change in wheat observed through the structure and expression of α/β-gliadin genes. Funct Integr Genomics. 2012 2012 Jun;12(2):341-55. Epub 2012 Feb 28. PubMed PMID: 22370744
Manickavelu A, Kawaura K, Oishi K, Shin-I T, Kohara Y, Yahiaoui N, Keller B, Abe R, Suzuki A, Nagayama T, Yano K, Ogihara Y. Comprehensive Functional Analyses of Expressed Sequence Tags in Common Wheat (Triticum aestivum). DNA Res. 2012 Apr;19(2):165-77. Epub 2012 Feb 14. PubMed PMID: 22334568
Kawaura K, Saeki A, Masumura T, Morita S, Ogihara Y. Heteroplasmy and expression of mitochondrial genes in alloplasmic and euplasmic wheat. Genes Genet Syst. 2011;86(4):249-55. PubMed PMID: 22214593
Tang J, Ohyama K, Kawaura K, Hashinokuchi H, Kamiya Y, Suzuki M, Muranaka T, Ogihara Y . A New Insight into Application for Barley Chromosome Addition Lines of Common Wheat: Achievement of Stigmasterol Accumulation. Plant Physiol. 2011 Sep 27. [Epub ahead of print] PubMed PMID: 21951468.
Kumashiro S, Matsukura K, Kawaura K, Matsumura M, Ogihara Y, Tokuda M. Effect of barley chromosome addition on the susceptibility of wheat to feeding by a gall-inducing leafhopper. Naturwissenschaften. 2011 Nov;98(11):983-7. Epub 2011 Sep 25. PubMed PMID: 21947194
Nakamura S, Abe F, Kawahigashi H, Nakazono K, Tagiri A, Matsumoto T, Utsugi S, Ogawa T, Handa H, Ishida H, Mori M, Kawaura K, Ogihara Y, Miura H. A Wheat Homolog of MOTHER OF FT AND TFL1 Acts in the Regulation of Germination. Plant Cell. 2011 Sep 6. [Epub ahead of print] PubMed PMID: 21896881.
Kanako Kawaura, Tsuneyuki Naruse, Keisuke Sekine, Yasunari Ogihara. Assessment of salt tolerance in Xinjiang Uighur wheat. eWIS111: 5-10
Manickavelu A, Kawaura K, Imamura H, Mori M, Ogihara Y. Molecular mapping of quantitative trait loci for domestication traits and β-glucan content in a wheat recombinant inbred line population Euphytica 2010 117(2) 179-190
Manickavelu A, Kawaura K, Oishi K, Shin-I T, Kohara Y, Yahiaoui N, Keller B, Suzuki A, Yano K, Ogihara Y. Comparative Gene Expression Analysis of Susceptible and Resistant Near-Isogenic Lines in Common Wheat Infected by Puccinia triticina. DNA Res. 2010 Aug; 17(4): 211-22 PubMed PMID: 20360266.
Kawaura K*, Mochida K*, Enju A, Totoki Y, Toyoda A, Sakaki Y, Kai C, Kawai J, Hayashizaki Y, Seki M, Shinozaki K, Ogihara Y. Assessment of adaptive evolution between wheat and rice as deduced from the full-length cDNA sequence data and the expression patterns of common wheat. BMC Genomics. 2009 Jun 18;10(1):271. [Epub ahead of print] PubMed PMID: 19534823.
Kobayashi F, Maeta E, Terashima A, Kawaura K, Ogihara Y, Takumi S. Development of abiotic stress tolerance via bZIP-type transcription factor LIP19 in common wheat. J Exp Bot. 2008 ;59(4):891-905. Epub 2008 Mar 7.K
Kawaura K, Mochida K, Ogihara Y.. Genome-wide analysis for identification of salt-responsive genes in common wheat.Funct Integr Genomics. 2008 Aug;8(3):277-86. Epub 2008 Mar 5.
Nomura T, Nasuda S, Kawaura K, Ogihara Y, Kato N, Sato F, Kojima T, Toyoda A, Iwamura H, Endo TR. Structures of the three homoeologous loci of wheat benzoxazinone biosynthetic genes TaBx3 and TaBx4 and characterization of their promoter sequences. Theor Appl Genet. 2008 Feb;116(3):373-81. Epub 2007 Nov 27.
Shitsukawa N, Tahira C, Kassai K, Hirabayashi C, Shimizu T, Takumi S, Mochida K, Kawaura K, Ogihara Y, Murai K. Genetic and epigenetic alteration among three homoeologous genes of a class E MADS box gene in hexaploid wheat. Plant Cell. 2007 Jun;19(6):1723-37. Epub 2007 Jun 22.
Sasaki T, Ryan PR, Delhaize E, Hebb DM, Ogihara Y, Kawaura K, Noda K, Kojima T, Toyoda A, Matsumoto H, Yamamoto Y. Sequence Upstream of the Wheat (Triticum aestivum L.) ALMT1 Gene and Its Relationship to Aluminum Resistance.Plant Cell Physiol. 2006 Oct;47(10):1343-54. Epub 2006 Aug 23.
Mochida K, Kawaura K, Shimosaka E, Kawakami N, Shin-I T, Kohara Y, Yamazaki Y, Ogihara Y. Tissue expression map of a large number of expressed sequence tags and its application to in silico screening of stress response genes in common wheat. Mol Genet Genomics. 2006 Sep;276(3):304-12
Koike M, Kawaura K, Ogihara Y, Torada A. Isolation and characterization of SSR sequences from the genome and TAC clones of common wheat using the PCR technique. Genome. 2006 May;49(5):432-44.
Kawaura K, Mochida K, Yamazaki Y, Ogihara Y. Transcriptome analysis of salinity stress responses in common wheat using a 22k oligo-DNA microarray. Funct Integr Genomics. 2006 Mar;6(2):132-42.
Kawaura K, Mochida K, Ogihara Y. Expression profile of two storage-protein gene families in hexaploid wheat revealed by large-scale analysis of expressed sequence tags. Plant Physiol. 2005 Dec;139(4):1870-80.
Ogihara Y, Mochida K, Kawaura K, Murai K, Seki M, Kamiya A, Shinozaki K, Carninci P, Hayashizaki Y, Shin-I T, Kohara Y, Yamazaki Y. Construction of a full-length cDNA library from young spikelets of hexaploid wheat and its characterization by large-scale sequencing of expressed sequence tags.Genes Genet Syst. 2004 Aug;79(4):227-32.
Liu YG, Nagaki K, Fujita M, Kawaura K, Uozumi M, Ogihara Y. Development of an efficient maintenance and screening system for large-insert genomic DNA libraries of hexaploid wheat in a transformation-competent artificial chromosome (TAC) vector. Plant J. 2000 Sep;23(5):687-95.
Books/ Reviews
加星光子, 安倍史高, 石田祐二, 神谷容子, 川浦香奈子, 小鞠敏彦： コムギの形質転換およびゲノム編集 植物バイオテクノロジー入門 国際文献社 pp23-36 (2022) Japanese
川浦香奈子・荻原保成： コムギ種子貯蔵タンパク質遺伝子のトランスクリプトーム解析. 種子の科学とバイオテクノロジー 学会出版センター pp191-194 (2009) Japanese